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Sample GSM437976 Query DataSets for GSM437976
Status Public on Jan 13, 2010
Title MCF-7-100 ng WG-DASL rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics platform_id: WG-DASL
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17575 Whole-Genome Gene Expression Profiling of FFPE Tissue Samples with WG-DASL and IVT-based assays
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7-100 WGD rep1.Avg_NBEADS
MCF-7-100 WGD rep1.BEAD_STDERR
MCF-7-100 WGD rep1.Detection Pval

Data table
ID_REF VALUE MCF-7-100 WGD rep1.Avg_NBEADS MCF-7-100 WGD rep1.BEAD_STDERR MCF-7-100 WGD rep1.Detection Pval
ILMN_1762337 598.9382 55 44.89551 0
ILMN_2055271 87.07484 38 5.128403 0.01941748
ILMN_2383229 38.32502 31 3.078111 0.6019418
ILMN_1806310 40.06798 37 3.699339 0.4919094
ILMN_1779670 39.73901 43 2.537546 0.5145631
ILMN_2321282 53.08864 36 4.834853 0.07119741
ILMN_1772582 86.6579 44 7.508049 0.01941748
ILMN_1717783 163.0802 36 18.84766 0
ILMN_1814316 38.99489 34 4.621303 0.5663431
ILMN_2359168 41.48463 44 4.277438 0.3786408
ILMN_1731507 31.2382 32 5.368139 0.9676375
ILMN_1787689 50.67289 34 5.463977 0.08090615
ILMN_1745607 62.51253 46 6.98326 0.03883495
ILMN_2136495 83.71418 34 6.100406 0.01941748
ILMN_1668111 38.9352 29 4.274986 0.5728155
ILMN_2295559 40.78732 48 3.504035 0.4401295
ILMN_1735045 266.4243 32 34.62752 0
ILMN_1680754 47.01355 38 3.386389 0.1521036
ILMN_2375184 45.92999 39 4.703135 0.1779935
ILMN_1659452 44.23923 48 3.630425 0.236246

Total number of rows: 24526

Table truncated, full table size 942 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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