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Sample GSM437968 Query DataSets for GSM437968
Status Public on Jan 13, 2010
Title R/M 25/75 rep2
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876); Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics ratio mix: 25% Raji/75% MCF-7
cell types: Burkitts Lymphoma (Raji) and Breast Adenocarcinoma (MCF-7)
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17573 Whole-Genome Gene Expression Profiling of FFPE Raji and MCF-7 Mixed Ratio Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
R/M 25/75 rep2.Avg_NBEADS
R/M 25/75 rep2.BEAD_STDERR
R/M 25/75 rep2.Detection Pval

Data table
ID_REF VALUE R/M 25/75 rep2.Avg_NBEADS R/M 25/75 rep2.BEAD_STDERR R/M 25/75 rep2.Detection Pval
ILMN_1762337 4317.766 51 236.5687 0
ILMN_2055271 157.3504 31 16.85492 0.0420712
ILMN_2383229 66.80086 31 20.58128 0.197411
ILMN_1806310 48.223 35 10.91506 0.3883495
ILMN_1779670 52.80355 48 11.8089 0.3300971
ILMN_2321282 92.17603 50 13.05999 0.0776699
ILMN_1772582 341.8217 40 24.94013 0.01618123
ILMN_1717783 607.1866 41 49.27675 0
ILMN_1814316 605.0979 43 38.95816 0
ILMN_2359168 636.3574 49 33.36611 0
ILMN_1731507 83.03616 36 14.5616 0.09385113
ILMN_1787689 64.83571 39 9.400307 0.2038835
ILMN_1745607 92.60183 39 17.35093 0.0776699
ILMN_2136495 227.5111 39 16.62366 0.02588997
ILMN_1668111 28.17914 44 9.342904 0.6763754
ILMN_2295559 44.0517 45 11.94332 0.4401295
ILMN_1735045 3605.03 52 178.3185 0
ILMN_1680754 30.86959 20 25.54543 0.6440129
ILMN_2375184 103.9016 51 11.87438 0.06472492
ILMN_1659452 111.9978 31 9.566298 0.06148867

Total number of rows: 24526

Table truncated, full table size 937 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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