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Sample GSM437954 Query DataSets for GSM437954
Status Public on Jan 13, 2010
Title R/M 100/0 rep2
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics cell type: Burkitts Lymphoma (Raji)
ratio mix: 100% Raji
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17573 Whole-Genome Gene Expression Profiling of FFPE Raji and MCF-7 Mixed Ratio Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
R/M 100/0 rep2.Avg_NBEADS
R/M 100/0 rep2.BEAD_STDERR
R/M 100/0 rep2.Detection Pval

Data table
ID_REF VALUE R/M 100/0 rep2.Avg_NBEADS R/M 100/0 rep2.BEAD_STDERR R/M 100/0 rep2.Detection Pval
ILMN_1762337 6538.365 33 274.326 0
ILMN_2055271 467.3925 33 16.63566 0.04530744
ILMN_2383229 47.00144 29 13.79285 0.5857605
ILMN_1806310 48.95541 33 11.14398 0.5598705
ILMN_1779670 142.6702 39 13.86883 0.1618123
ILMN_2321282 284.8582 31 19.18239 0.07119741
ILMN_1772582 1242.577 38 20.36882 0.006472492
ILMN_1717783 40.77833 24 16.1693 0.6763754
ILMN_1814316 4183.857 31 143.8006 0
ILMN_2359168 4216.438 34 138.0203 0
ILMN_1731507 783.189 36 17.21208 0.02265372
ILMN_1787689 234.9993 33 10.89044 0.09385113
ILMN_1745607 21.33071 28 14.76728 0.9029126
ILMN_2136495 -1.404425 26 18.98312 0.9805825
ILMN_1668111 38.49436 34 8.829997 0.7022654
ILMN_2295559 58.29441 41 8.169724 0.4660194
ILMN_1735045 6641.784 37 331.2996 0
ILMN_1680754 81.97066 36 11.6935 0.2912621
ILMN_2375184 150.7561 36 17.48656 0.1618123
ILMN_1659452 211.0415 33 14.37374 0.1035599

Total number of rows: 24526

Table truncated, full table size 952 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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