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Sample GSM437953 Query DataSets for GSM437953
Status Public on Jan 13, 2010
Title R/M 100/0 rep1
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics cell type: Burkitts Lymphoma (Raji)
ratio mix: 100% Raji
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17573 Whole-Genome Gene Expression Profiling of FFPE Raji and MCF-7 Mixed Ratio Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
R/M 100/0 rep1.Avg_NBEADS
R/M 100/0 rep1.BEAD_STDERR
R/M 100/0 rep1.Detection Pval

Data table
ID_REF VALUE R/M 100/0 rep1.Avg_NBEADS R/M 100/0 rep1.BEAD_STDERR R/M 100/0 rep1.Detection Pval
ILMN_1762337 6075.289 68 205.8816 0
ILMN_2055271 442.3536 26 19.85912 0.04530744
ILMN_2383229 94.35861 36 16.27458 0.2912621
ILMN_1806310 38.52936 27 15.78661 0.7152104
ILMN_1779670 37.90472 52 12.54611 0.7249191
ILMN_2321282 308.4962 39 12.15554 0.06796116
ILMN_1772582 1498.438 41 29.40358 0.003236246
ILMN_1717783 104.8017 37 12.496 0.2556634
ILMN_1814316 4275.563 43 138.1346 0
ILMN_2359168 4237.566 29 208.9512 0
ILMN_1731507 997.127 31 24.41745 0.01618123
ILMN_1787689 230.3893 34 14.17388 0.09061489
ILMN_1745607 43.89008 42 12.13429 0.6601942
ILMN_2136495 118.9896 26 14.03044 0.2265372
ILMN_1668111 25.45014 36 11.53641 0.8543689
ILMN_2295559 67.38207 37 10.67032 0.4142395
ILMN_1735045 6038.312 51 274.3529 0
ILMN_1680754 2.377736 33 22.10286 0.9838188
ILMN_2375184 145.3092 57 11.0757 0.1682848
ILMN_1659452 264.2634 36 12.22556 0.0776699

Total number of rows: 24526

Table truncated, full table size 953 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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