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Sample GSM437943 Query DataSets for GSM437943
Status Public on Jan 13, 2010
Title FFPE #3-200 ng rep2
Sample type RNA
 
Source name Human ovarian tumor
Organism Homo sapiens
Characteristics gender: Female
tissue: Ovary
Extracted molecule total RNA
Extraction protocol RNA was extracted with a modified protocol of the RNeasy FFPE Kit (Qiagen)
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17572 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Ovarian Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
FFPE #3-200 rep2.Avg_NBEADS
FFPE #3-200 rep2.BEAD_STDERR
FFPE #3-200 rep2.Detection Pval

Data table
ID_REF VALUE FFPE #3-200 rep2.Avg_NBEADS FFPE #3-200 rep2.BEAD_STDERR FFPE #3-200 rep2.Detection Pval
ILMN_1762337 352.1793 49 20.93284 0
ILMN_2055271 402.2525 24 14.5337 0
ILMN_2383229 92.57217 29 6.295826 0.04854369
ILMN_1806310 69.1543 46 4.024298 0.0776699
ILMN_1779670 438.1107 43 12.89966 0
ILMN_2321282 124.5212 32 8.729715 0.02588997
ILMN_1772582 76.8759 37 5.433403 0.06148867
ILMN_1717783 51.2887 45 3.945709 0.2071197
ILMN_1814316 8484.506 35 273.4528 0
ILMN_2359168 8271.653 36 314.2292 0
ILMN_1731507 735.3166 42 40.03828 0
ILMN_1787689 68.0013 31 5.504212 0.0776699
ILMN_1745607 5880.296 38 267.1304 0
ILMN_2136495 455.8021 37 15.11664 0
ILMN_1668111 70.38098 30 3.126388 0.06796116
ILMN_2295559 39.57441 47 4.409468 0.5889968
ILMN_1735045 1003.396 38 83.94815 0
ILMN_1680754 61.10702 26 6.448474 0.1067961
ILMN_2375184 171.6353 46 7.487617 0.01294498
ILMN_1659452 173.1932 46 6.340254 0.01294498

Total number of rows: 24526

Table truncated, full table size 928 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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