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Sample GSM437940 Query DataSets for GSM437940
Status Public on Jan 13, 2010
Title FFPE #4-200 ng rep1
Sample type RNA
 
Source name Human ovarian tumor
Organism Homo sapiens
Characteristics gender: Female
tissue: Ovary
Extracted molecule total RNA
Extraction protocol RNA was extracted with a modified protocol of the RNeasy FFPE Kit (Qiagen)
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17572 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Ovarian Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
FFPE #4-200 rep1.Avg_NBEADS
FFPE #4-200 rep1.BEAD_STDERR
FFPE #4-200 rep1.Detection Pval

Data table
ID_REF VALUE FFPE #4-200 rep1.Avg_NBEADS FFPE #4-200 rep1.BEAD_STDERR FFPE #4-200 rep1.Detection Pval
ILMN_1762337 849.1962 40 31.13185 0
ILMN_2055271 413.3846 39 10.5746 0
ILMN_2383229 211.6714 31 5.224846 0.01294498
ILMN_1806310 50.69854 36 2.651751 0.223301
ILMN_1779670 1011.249 47 20.13436 0
ILMN_2321282 92.46949 42 3.138734 0.0420712
ILMN_1772582 494.9431 37 14.99942 0
ILMN_1717783 234.5562 38 11.07758 0.01294498
ILMN_1814316 5248.441 34 162.5015 0
ILMN_2359168 4955.505 48 94.73053 0
ILMN_1731507 135.2336 48 4.979947 0.03236246
ILMN_1787689 63.1535 33 3.412125 0.1100324
ILMN_1745607 3301.38 36 119.8482 0
ILMN_2136495 426.8383 18 13.70899 0
ILMN_1668111 87.84146 42 2.790598 0.05501618
ILMN_2295559 35.83973 46 2.597383 0.7702265
ILMN_1735045 1066.547 42 41.23637 0
ILMN_1680754 54.56522 21 3.198178 0.1650485
ILMN_2375184 116.7312 46 3.324044 0.03559871
ILMN_1659452 118.5852 51 3.33582 0.03559871

Total number of rows: 24526

Table truncated, full table size 931 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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