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Sample GSM437757 Query DataSets for GSM437757
Status Public on Jan 13, 2010
Title MCF-7 10 pg rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 10 pg
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 10 pg rep2.Avg_NBEADS
MCF-7 10 pg rep2.BEAD_STDERR
MCF-7 10 pg rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 10 pg rep2.Avg_NBEADS MCF-7 10 pg rep2.BEAD_STDERR MCF-7 10 pg rep2.Detection Pval
ILMN_1762337 3277.542 46 3.480179 0.04854369
ILMN_2055271 3534.943 26 3.005822 0.03559871
ILMN_2383229 41.29245 29 3.815951 0.7799353
ILMN_1806310 67.05419 31 2.83785 0.5889968
ILMN_1779670 277.9144 38 3.447143 0.3754045
ILMN_2321282 37.67673 27 1.673344 0.8576052
ILMN_1772582 750.8404 38 2.190202 0.2330097
ILMN_1717783 781.3646 28 3.657212 0.223301
ILMN_1814316 158.2352 33 2.91219 0.4401295
ILMN_2359168 469.731 42 2.96112 0.3106796
ILMN_1731507 42.10767 28 2.309516 0.7669903
ILMN_1787689 1585.544 41 2.081342 0.1100324
ILMN_1745607 40.48093 32 2.786409 0.7961165
ILMN_2136495 51.10587 30 1.655328 0.6634304
ILMN_1668111 53.45098 31 3.765647 0.6375405
ILMN_2295559 43.9616 42 1.883586 0.7411003
ILMN_1735045 45.04396 43 1.95975 0.7346278
ILMN_1680754 921.9215 34 2.509982 0.1909385
ILMN_2375184 2631.555 32 5.441523 0.0776699
ILMN_1659452 3128.466 34 3.248808 0.04854369

Total number of rows: 24526

Table truncated, full table size 1011 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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