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Sample GSM437756 Query DataSets for GSM437756
Status Public on Jan 13, 2010
Title MCF-7 10 pg rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 10 pg
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 10 pg rep1.Avg_NBEADS
MCF-7 10 pg rep1.BEAD_STDERR
MCF-7 10 pg rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 10 pg rep1.Avg_NBEADS MCF-7 10 pg rep1.BEAD_STDERR MCF-7 10 pg rep1.Detection Pval
ILMN_1762337 5509.184 28 92.9148 0
ILMN_2055271 3099.205 35 2.843538 0.05501618
ILMN_2383229 58.6043 27 3.823671 0.5954692
ILMN_1806310 76.09926 41 2.490688 0.5436893
ILMN_1779670 302.2524 38 1.824704 0.3754045
ILMN_2321282 53.15926 38 1.45748 0.6440129
ILMN_1772582 183.6198 37 1.860414 0.4304207
ILMN_1717783 59.1928 27 2.68782 0.592233
ILMN_1814316 49.33106 31 2.709682 0.6893204
ILMN_2359168 177.215 37 2.51338 0.4401295
ILMN_1731507 31.30798 44 1.874455 0.9223301
ILMN_1787689 1125.453 37 2.208811 0.1877023
ILMN_1745607 33.51643 31 2.740983 0.8899676
ILMN_2136495 29.37694 34 2.120507 0.9514563
ILMN_1668111 33.04774 39 1.930188 0.8996764
ILMN_2295559 70.74824 40 2.35798 0.5566343
ILMN_1735045 4952.303 42 48.44639 0
ILMN_1680754 935.417 27 1.856657 0.2168285
ILMN_2375184 1169.161 51 1.9595 0.184466
ILMN_1659452 3293.067 39 3.000953 0.05177994

Total number of rows: 24526

Table truncated, full table size 1011 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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