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Sample GSM437751 Query DataSets for GSM437751
Status Public on Jan 13, 2010
Title MCF-7 1 ng rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 1 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 1 ng rep2.Avg_NBEADS
MCF-7 1 ng rep2.BEAD_STDERR
MCF-7 1 ng rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 1 ng rep2.Avg_NBEADS MCF-7 1 ng rep2.BEAD_STDERR MCF-7 1 ng rep2.Detection Pval
ILMN_1762337 1714.885 43 127.1886 0
ILMN_2055271 96.98025 25 5.329276 0.03559871
ILMN_2383229 40.44585 30 3.598293 0.5728155
ILMN_1806310 43.1303 34 3.578175 0.5145631
ILMN_1779670 45.74105 42 3.332345 0.433657
ILMN_2321282 61.78142 42 3.678876 0.1585761
ILMN_1772582 158.686 30 14.91048 0
ILMN_1717783 571.0836 30 88.57928 0
ILMN_1814316 44.49565 30 2.728855 0.4724919
ILMN_2359168 51.14688 37 3.508111 0.3042071
ILMN_1731507 33.16003 39 4.13344 0.8122978
ILMN_1787689 63.17113 39 4.025949 0.1423948
ILMN_1745607 32.7032 37 3.479286 0.8220065
ILMN_2136495 31.03781 42 3.166975 0.8511327
ILMN_1668111 34.3154 36 4.026897 0.7734628
ILMN_2295559 39.06688 48 3.348139 0.6278317
ILMN_1735045 1162.946 44 92.45902 0
ILMN_1680754 49.36134 37 3.258564 0.3430421
ILMN_2375184 63.63551 47 4.140387 0.1359223
ILMN_1659452 74.49924 44 4.82809 0.09385113

Total number of rows: 24526

Table truncated, full table size 934 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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