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Sample GSM437747 Query DataSets for GSM437747
Status Public on Jan 13, 2010
Title MCF-7 10 ng rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 10 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 10 ng rep2.Avg_NBEADS
MCF-7 10 ng rep2.BEAD_STDERR
MCF-7 10 ng rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 10 ng rep2.Avg_NBEADS MCF-7 10 ng rep2.BEAD_STDERR MCF-7 10 ng rep2.Detection Pval
ILMN_1762337 1118.603 50 112.3578 0
ILMN_2055271 120.9599 32 14.55869 0.009708738
ILMN_2383229 26.41253 36 7.558539 0.9320388
ILMN_1806310 39.75263 38 5.235197 0.4368932
ILMN_1779670 35.6796 50 5.894773 0.605178
ILMN_2321282 56.45314 34 8.407848 0.04854369
ILMN_1772582 77.62964 34 12.7172 0.02588997
ILMN_1717783 307.7211 36 40.40712 0
ILMN_1814316 38.38252 29 3.330653 0.4627832
ILMN_2359168 35.79018 48 5.531807 0.5987055
ILMN_1731507 33.23902 40 5.971385 0.7152104
ILMN_1787689 48.55059 36 6.495515 0.1165049
ILMN_1745607 86.63776 49 13.87893 0.01941748
ILMN_2136495 19.85293 26 6.765713 0.9838188
ILMN_1668111 36.21113 36 6.724442 0.5857605
ILMN_2295559 36.07098 44 5.274056 0.592233
ILMN_1735045 330.9006 52 42.45002 0
ILMN_1680754 44.94284 29 9.1724 0.2038835
ILMN_2375184 46.2206 56 8.540268 0.171521
ILMN_1659452 49.73323 41 8.632914 0.09708738

Total number of rows: 24526

Table truncated, full table size 938 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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