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Sample GSM437746 Query DataSets for GSM437746
Status Public on Jan 13, 2010
Title MCF-7 10 ng rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 10 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 10 ng rep1.Avg_NBEADS
MCF-7 10 ng rep1.BEAD_STDERR
MCF-7 10 ng rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 10 ng rep1.Avg_NBEADS MCF-7 10 ng rep1.BEAD_STDERR MCF-7 10 ng rep1.Detection Pval
ILMN_1762337 991.4307 42 95.95374 0
ILMN_2055271 137.4612 36 13.93716 0
ILMN_2383229 47.08199 31 8.539306 0.1423948
ILMN_1806310 28.90177 26 9.967184 0.8576052
ILMN_1779670 36.6486 33 9.472559 0.5469255
ILMN_2321282 48.93407 38 8.42903 0.09708738
ILMN_1772582 105.18 42 12.00517 0.01618123
ILMN_1717783 333.5226 41 43.30127 0
ILMN_1814316 34.32719 32 7.932924 0.6699029
ILMN_2359168 46.74046 36 5.503254 0.1456311
ILMN_1731507 34.79113 38 9.216243 0.6472492
ILMN_1787689 46.62128 32 8.869643 0.1456311
ILMN_1745607 70.32692 33 10.98721 0.03883495
ILMN_2136495 67.21954 31 8.89208 0.03883495
ILMN_1668111 33.95871 37 7.405393 0.6796116
ILMN_2295559 29.27518 43 8.190405 0.8381877
ILMN_1735045 317.1795 51 35.18663 0
ILMN_1680754 39.75592 21 7.50236 0.3721683
ILMN_2375184 48.60297 39 7.173463 0.1035599
ILMN_1659452 43.45939 59 5.209359 0.236246

Total number of rows: 24526

Table truncated, full table size 936 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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