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Sample GSM437745 Query DataSets for GSM437745
Status Public on Jan 13, 2010
Title MCF-7 50 ng rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 50 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 50 ng rep2.Avg_NBEADS
MCF-7 50 ng rep2.BEAD_STDERR
MCF-7 50 ng rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 50 ng rep2.Avg_NBEADS MCF-7 50 ng rep2.BEAD_STDERR MCF-7 50 ng rep2.Detection Pval
ILMN_1762337 989.4887 41 90.28807 0
ILMN_2055271 131.2681 37 13.726 0.006472492
ILMN_2383229 39.55289 37 7.338443 0.4304207
ILMN_1806310 24.46428 27 6.6198 0.9644013
ILMN_1779670 25.49794 46 5.058495 0.9514563
ILMN_2321282 50.20916 29 7.01254 0.09061489
ILMN_1772582 97.06874 31 14.16938 0.01618123
ILMN_1717783 258.8565 38 48.64861 0
ILMN_1814316 33.79916 37 6.615539 0.6731392
ILMN_2359168 30.37641 40 6.610401 0.802589
ILMN_1731507 22.68994 33 8.699237 0.9805825
ILMN_1787689 47.4185 38 6.964069 0.1521036
ILMN_1745607 61.51547 30 10.2134 0.0420712
ILMN_2136495 134.5736 36 18.88317 0.006472492
ILMN_1668111 29.74818 30 7.095154 0.8414239
ILMN_2295559 35.49376 42 6.636173 0.592233
ILMN_1735045 408.4365 45 52.00382 0
ILMN_1680754 42.11108 32 7.611318 0.3009709
ILMN_2375184 39.60863 39 9.268927 0.4271845
ILMN_1659452 43.38848 50 7.942451 0.2556634

Total number of rows: 24526

Table truncated, full table size 938 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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