NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM437744 Query DataSets for GSM437744
Status Public on Jan 13, 2010
Title MCF-7 50 ng rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 50 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 50 ng rep1.Avg_NBEADS
MCF-7 50 ng rep1.BEAD_STDERR
MCF-7 50 ng rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 50 ng rep1.Avg_NBEADS MCF-7 50 ng rep1.BEAD_STDERR MCF-7 50 ng rep1.Detection Pval
ILMN_1762337 866.5684 36 103.8903 0
ILMN_2055271 115.2205 36 10.61207 0.006472492
ILMN_2383229 39.41903 38 9.433026 0.3462783
ILMN_1806310 38.99813 37 7.338769 0.3656958
ILMN_1779670 40.93727 50 6.406674 0.2847897
ILMN_2321282 56.02635 33 6.418902 0.05177994
ILMN_1772582 101.4748 45 12.84183 0.01618123
ILMN_1717783 267.129 40 39.21599 0
ILMN_1814316 43.62928 35 8.178322 0.2071197
ILMN_2359168 31.95462 36 6.809559 0.7378641
ILMN_1731507 41.0636 30 6.709838 0.2847897
ILMN_1787689 53.90278 36 7.594896 0.05501618
ILMN_1745607 51.56371 52 5.723773 0.0776699
ILMN_2136495 109.8723 46 13.06648 0.01294498
ILMN_1668111 28.1448 39 7.816195 0.8673139
ILMN_2295559 37.39815 45 5.451323 0.4401295
ILMN_1735045 352.2347 43 33.24392 0
ILMN_1680754 41.32153 17 8.376128 0.2783172
ILMN_2375184 54.49438 44 7.7381 0.05177994
ILMN_1659452 48.55667 44 6.765275 0.1100324

Total number of rows: 24526

Table truncated, full table size 941 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap