NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM437738 Query DataSets for GSM437738
Status Public on Jan 13, 2010
Title Raji 50 pg rep1
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics cell type: Burkitts Lymphoma (Raji)
input: 50 pg
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
Raji 50 pg rep1.Avg_NBEADS
Raji 50 pg rep1.BEAD_STDERR
Raji 50 pg rep1.Detection Pval

Data table
ID_REF VALUE Raji 50 pg rep1.Avg_NBEADS Raji 50 pg rep1.BEAD_STDERR Raji 50 pg rep1.Detection Pval
ILMN_1762337 2182.188 39 17.72034 0
ILMN_2055271 1358.391 35 3.559937 0.0420712
ILMN_2383229 121.6362 37 2.861587 0.3527508
ILMN_1806310 42.20561 33 3.110673 0.7087379
ILMN_1779670 45.0173 37 2.091667 0.6601942
ILMN_2321282 131.045 38 3.073335 0.3268608
ILMN_1772582 92.9442 32 3.350424 0.3915858
ILMN_1717783 123.4102 29 3.313564 0.3527508
ILMN_1814316 55.2125 39 2.604961 0.5339806
ILMN_2359168 172.3166 30 3.444099 0.2912621
ILMN_1731507 22.9284 33 2.599699 0.97411
ILMN_1787689 583.0762 30 3.863535 0.1132686
ILMN_1745607 34.9403 35 2.867831 0.8381877
ILMN_2136495 30.34539 26 2.66765 0.9223301
ILMN_1668111 42.8532 41 2.910182 0.6957929
ILMN_2295559 38.89717 38 3.232814 0.7540453
ILMN_1735045 1925.759 37 9.897807 0
ILMN_1680754 317.4354 40 3.542265 0.1909385
ILMN_2375184 424.4782 43 4.611505 0.1618123
ILMN_1659452 926.278 48 3.505282 0.08414239

Total number of rows: 24526

Table truncated, full table size 986 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap