NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM437718 Query DataSets for GSM437718
Status Public on Jan 13, 2010
Title MCF-7 intact rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics treatment: intact
cell type: Breast Adenocarcinoma (MCF-7)
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17564 Whole-Genome Gene Expression of Formalin-Fixed, Paraffin-Embedded Intact and Artificially Degraded Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 intact rep1.Avg_NBEADS
MCF-7 intact rep1.BEAD_STDERR
MCF-7 intact rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 intact rep1.Avg_NBEADS MCF-7 intact rep1.BEAD_STDERR MCF-7 intact rep1.Detection Pval
ILMN_1762337 342.3352 48 18.48485 0
ILMN_2055271 40.57887 22 3.872256 0.1035599
ILMN_2383229 38.09312 37 2.67067 0.1747573
ILMN_1806310 32.76092 39 1.900216 0.5307443
ILMN_1779670 31.4132 42 2.987842 0.6407767
ILMN_2321282 40.49676 34 4.075147 0.1035599
ILMN_1772582 45.72578 35 3.472803 0.07119741
ILMN_1717783 74.50014 36 6.846826 0.01941748
ILMN_1814316 29.866 35 2.344932 0.7637541
ILMN_2359168 36.46903 36 3.244288 0.223301
ILMN_1731507 25.04896 32 1.544056 0.9838188
ILMN_1787689 34.3425 29 1.868327 0.4012945
ILMN_1745607 40.20663 40 2.658842 0.1100324
ILMN_2136495 41.94178 28 3.378 0.09061489
ILMN_1668111 27.56191 45 2.661533 0.8996764
ILMN_2295559 32.32092 45 1.702457 0.5631068
ILMN_1735045 172.4368 47 9.430467 0
ILMN_1680754 38.02887 39 2.628866 0.1812298
ILMN_2375184 39.31193 41 3.638571 0.1294498
ILMN_1659452 40.11642 45 2.430263 0.1132686

Total number of rows: 24526

Table truncated, full table size 963 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap