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Sample GSM4310355 Query DataSets for GSM4310355
Status Public on Sep 23, 2020
Title PSECS_4A4
Sample type SRA
 
Source name Primary Mouse Epithelial Progenitor Cells
Organism Mus musculus
Characteristics age: Adult (12wk)
tissue: Salivary Gland
antibodies: 4A4 mouse monoclonal anti-p63
genotype/variation: p63 WildType mouse
Extracted molecule genomic DNA
Extraction protocol IP performed using the iDeal ChIP-Seq Kit on the Diagenode SX-G8 IP-Star Compact System.
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
 
Description PSECS_4A4_vs_Input.bed.gz
Data processing Reads were mapped to the Mus musculus genome (mm9 build) using Bowtie (v1.1.1).
macs2 (v2.1.0) was used to call peaks
Genome_build: mm9
Supplementary_files_format_and_content: macs2 peak-calling output
 
Submission date Feb 13, 2020
Last update date Sep 23, 2020
Contact name Jonathan E Bard
E-mail(s) jbard@buffalo.edu
Organization name University at Buffalo
Department Genomics and Bioinformatics Core
Street address 701 Ellicott Street
City Buffalo
State/province New York
ZIP/Postal code 14203
Country USA
 
Platform ID GPL17021
Series (2)
GSE145264 p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling [ChIP-seq]
GSE145268 p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling
Relations
BioSample SAMN14096521
SRA SRX7719464

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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