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Sample GSM417697 Query DataSets for GSM417697
Status Public on Aug 02, 2013
Title Before laughing vs After laughing prior to training in under-expression group
Sample type RNA
 
Channel 1
Source name Effective laugh maker training subjects
Organism Homo sapiens
Characteristics cell type: peripheral leukocyte
training: Effective laugh maker training
Treatment protocol Training subjects were laughed according to "Effective laugh maker" instruction for one week. Control subjects spent one week without laughter instructed by "Effective laugh maker".
Extracted molecule total RNA
Extraction protocol RNA was extracted from whole blood using the PAXgene™ Blood RNA System Kit following manufacturer's guidelines.
Label Cy3
Label protocol Agilent two-color Low RNA Input Linear Amplification Kit labeling protocol.
 
Channel 2
Source name Effective laugh maker training subjects
Organism Homo sapiens
Characteristics cell type: peripheral leukocyte
training: Effective laugh maker training
Treatment protocol Training subjects were laughed according to "Effective laugh maker" instruction for one week. Control subjects spent one week without laughter instructed by "Effective laugh maker".
Extracted molecule total RNA
Extraction protocol RNA was extracted from whole blood using the PAXgene™ Blood RNA System Kit following manufacturer's guidelines.
Label Cy5
Label protocol Agilent two-color Low RNA Input Linear Amplification Kit labeling protocol.
 
 
Hybridization protocol Agilent two-color gene expression hybridization and wash protocol.
Scan protocol Microarray slides were scanned in an Agilent Technologies G2505B Microarray Scanner at 5 micron resolution. Images were quantified using Agilent Feature Extraction software version 9.5.3.
Description Training subjects were laughed according to "Effective laugh maker" instruction for one week.
Data processing LOWESS normalized, background subtracted VALUE data obtained from log10 of processed Red signal/processed Green signal. Agilent software was used.
 
Submission date Jun 16, 2009
Last update date Aug 02, 2013
Contact name Miyo Hori
E-mail(s) hayashi@dna-chip.co.jp
Phone 81-45-500-5220
Fax 81-45-500-5219
Organization name DNA Chip Research Inc.
Department Business Development
Street address 1-1-43, Suehiro-cho
City Tsurumi-ku, Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platform ID GPL4133
Series (1)
GSE16641 Laughter specific genes and laughter sensitive genes

Data table header descriptions
ID_REF
VALUE LOWESS normalized log10 ratio (Cy5/Cy3)

Data table
ID_REF VALUE
12 -0.04271833
13 -0.121810415
14 -0.008593129
15 -0.038485509
16 0.012731527
17 -0.029673807
18 -0.173587284
19 0.092607107
20 0.084089886
21 0
22 -0.02089928
23 0.130301637
24 0.027164551
25 0.025878841
26 0.076091557
27 0.070310101
28 0
29 0
30 0.022739403
31 0

Total number of rows: 43376

Table truncated, full table size 681 Kbytes.




Supplementary file Size Download File type/resource
GSM417697.txt.gz 13.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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