NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM416586 Query DataSets for GSM416586
Status Public on Jun 01, 2010
Title 212409_Control
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 63
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Control
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 0.2035594
ILMN_1660305 0.002231598
ILMN_1762337 -0.59150934
ILMN_2055271 -0.55354595
ILMN_1814316 -0.6581454
ILMN_2359168 -0.56037045
ILMN_1731507 -0.36050224
ILMN_1787689 -0.5954604
ILMN_1745607 -0.64784
ILMN_2136495 -0.5097399
ILMN_1668111 -0.54428244
ILMN_2295559 -0.6378989
ILMN_1735045 -0.49172974
ILMN_1680754 -0.4670329
ILMN_2375184 -0.6214423
ILMN_1659452 -0.64543486
ILMN_1767388 -0.66488075
ILMN_1675204 -0.6688404
ILMN_1673870 -0.4581995
ILMN_1755321 -0.45916224

Total number of rows: 24424

Table truncated, full table size 580 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap