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Sample GSM416565 Query DataSets for GSM416565
Status Public on Jun 01, 2010
Title 3100084_Stroke
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 91
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Stroke
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 -0.13280344
ILMN_1660305 -0.04748535
ILMN_1762337 -0.20828581
ILMN_2055271 -0.2011776
ILMN_1814316 -0.28820753
ILMN_2359168 -0.13987255
ILMN_1731507 -0.31231737
ILMN_1787689 -0.10572815
ILMN_1745607 0.025568485
ILMN_2136495 -0.14123917
ILMN_1668111 -0.18144703
ILMN_2295559 -0.23959684
ILMN_1735045 -0.16329241
ILMN_1680754 -0.26594734
ILMN_2375184 -0.28713894
ILMN_1659452 -0.16355562
ILMN_1767388 -0.12057352
ILMN_1675204 -0.0793519
ILMN_1673870 -0.14460707
ILMN_1755321 -0.023743153

Total number of rows: 24424

Table truncated, full table size 587 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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