NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM416554 Query DataSets for GSM416554
Status Public on Jun 01, 2010
Title 3100197_Stroke
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 77
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Stroke
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 -0.41380835
ILMN_1660305 -0.26117897
ILMN_1762337 -0.12372255
ILMN_2055271 0.3166895
ILMN_1814316 0.002292156
ILMN_2359168 -0.24725866
ILMN_1731507 -0.22491026
ILMN_1787689 0.31870556
ILMN_1745607 -0.3019085
ILMN_2136495 -0.07097578
ILMN_1668111 -0.066149235
ILMN_2295559 0.022713184
ILMN_1735045 -0.17549849
ILMN_1680754 0.16426086
ILMN_2375184 -0.24501944
ILMN_1659452 -0.08105183
ILMN_1767388 -0.04405403
ILMN_1675204 null
ILMN_1673870 -0.08092737
ILMN_1755321 -0.15387583

Total number of rows: 24424

Table truncated, full table size 578 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap