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Sample GSM416553 Query DataSets for GSM416553
Status Public on Jun 01, 2010
Title 3100077_Stroke
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 75
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Stroke
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 0.07409334
ILMN_1660305 -0.22927189
ILMN_1762337 0.05390501
ILMN_2055271 0.044528008
ILMN_1814316 0.095062256
ILMN_2359168 0.21318531
ILMN_1731507 0.11038017
ILMN_1787689 0.14263344
ILMN_1745607 0.18535328
ILMN_2136495 0.44846725
ILMN_1668111 0.19434118
ILMN_2295559 0.15635824
ILMN_1735045 0.22915888
ILMN_1680754 -0.042799473
ILMN_2375184 0.13158083
ILMN_1659452 0.18701935
ILMN_1767388 0.18518353
ILMN_1675204 0.20404434
ILMN_1673870 0.10330868
ILMN_1755321 0.10220909

Total number of rows: 24424

Table truncated, full table size 575 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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