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Sample GSM4067414 Query DataSets for GSM4067414
Status Public on Sep 01, 2020
Title Retina, P30-3
Sample type SRA
 
Source name Retina
Organism Mus musculus
Characteristics strain: C57BL/6
tissue: retina
age: post natal day 30
Extracted molecule total RNA
Extraction protocol Retinas were removed, flash frozen on dry ice, and RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. Ribosome-deleted RNA.
RNA libraries were prepared for sequencing using standard Illumina protocols
 
Library strategy ncRNA-Seq
Library source transcriptomic
Library selection size fractionation
Instrument model HiSeq X Ten
 
Data processing use trimmomatic for filtering
use find_circ and CIRI for predicting
Genome_build: mm9
Supplementary_files_format_and_content: Excel file reports counts.
 
Submission date Sep 09, 2019
Last update date Sep 01, 2020
Contact name xue jiao chen
E-mail(s) chenxuejiao1022@163.com
Organization name wenzhou medical university
Street address xueyuan road
City wenzhou
ZIP/Postal code 325000
Country China
 
Platform ID GPL21273
Series (1)
GSE137128 circRNAs at 5 time points during retinal development of mouse
Relations
BioSample SAMN12717190
SRA SRX6820983

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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