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Sample GSM398025 Query DataSets for GSM398025
Status Public on Apr 28, 2009
Title GBM_Cell Line_6
Sample type RNA
 
Source name GBM
Organism Homo sapiens
Characteristics cell line: GBM
Treatment protocol Full details of the cell lines culture prior RNA extraction have been described by Fael Al-Mayhani et al, 2009
Growth protocol GBM cell lines were derived from excised GBM tumours and cultured under serum-free conditions with EGF and FGF. Full details of the derivation and culture protocol have been described by Fael Al-Mayhani et al, 2009
Extracted molecule total RNA
Extraction protocol RNA was extracted using Qiagen RNAeasy kit
Label Cy3
Label protocol Cy3
 
Hybridization protocol Standard Illumina hybridization protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Scan protocol Standard Illumina scan protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Description none
Data processing Robust spline normalization
 
Submission date Apr 27, 2009
Last update date Apr 27, 2009
Contact name Talal M. Fael Al-Mayhani
Phone 01223-331160
Fax 01223-331174
Organization name University of Cambridge
Department Clinical Neurosciences
Street address Forvie Site, Robinson Way
City Cambridge
State/province Cambridgeshire
ZIP/Postal code CB2 0PY
Country United Kingdom
 
Platform ID GPL6883
Series (1)
GSE15846 GBM cell lines derived and propagated according to Cambridge protocol

Data table header descriptions
ID_REF
VALUE robust spline normalization

Data table
ID_REF VALUE
ILMN_1809034 113.6924776
ILMN_1660305 473.1782382
ILMN_2055271 65.8264929
ILMN_1787689 63.41162187
ILMN_1745607 447.0679955
ILMN_1735045 63.94132271
ILMN_1680754 65.67605263
ILMN_1755321 183.1449712
ILMN_1698554 301.2895808
ILMN_2061446 1570.641819
ILMN_2270015 62.95693131
ILMN_1653165 415.3957029
ILMN_1662364 8104.9571
ILMN_1700461 1116.344843
ILMN_1674698 493.2252686
ILMN_1784269 474.3979296
ILMN_2096191 1245.301697
ILMN_2157219 280.7879444
ILMN_1703743 1045.683497
ILMN_1687609 71.42391577

Total number of rows: 16378

Table truncated, full table size 398 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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