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Sample GSM398024 Query DataSets for GSM398024
Status Public on Apr 28, 2009
Title GBM_Cell Line_5
Sample type RNA
 
Source name GBM
Organism Homo sapiens
Characteristics cell line: GBM
Treatment protocol Full details of the cell lines culture prior RNA extraction have been described by Fael Al-Mayhani et al, 2009
Growth protocol GBM cell lines were derived from excised GBM tumours and cultured under serum-free conditions with EGF and FGF. Full details of the derivation and culture protocol have been described by Fael Al-Mayhani et al, 2009
Extracted molecule total RNA
Extraction protocol RNA was extracted using Qiagen RNAeasy kit
Label Cy3
Label protocol Cy3
 
Hybridization protocol Standard Illumina hybridization protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Scan protocol Standard Illumina scan protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Description none
Data processing Robust spline normalization
 
Submission date Apr 27, 2009
Last update date Apr 27, 2009
Contact name Talal M. Fael Al-Mayhani
Phone 01223-331160
Fax 01223-331174
Organization name University of Cambridge
Department Clinical Neurosciences
Street address Forvie Site, Robinson Way
City Cambridge
State/province Cambridgeshire
ZIP/Postal code CB2 0PY
Country United Kingdom
 
Platform ID GPL6883
Series (1)
GSE15846 GBM cell lines derived and propagated according to Cambridge protocol

Data table header descriptions
ID_REF
VALUE robust spline normalization

Data table
ID_REF VALUE
ILMN_1809034 222.1285854
ILMN_1660305 455.2385979
ILMN_2055271 71.83454427
ILMN_1787689 73.90600852
ILMN_1745607 3584.416737
ILMN_1735045 54.6443783
ILMN_1680754 67.38469368
ILMN_1755321 198.3732275
ILMN_1698554 303.9886794
ILMN_2061446 490.813173
ILMN_2270015 61.24758412
ILMN_1653165 465.2400345
ILMN_1662364 8830.939823
ILMN_1700461 724.4621272
ILMN_1674698 343.5886425
ILMN_1784269 487.0945663
ILMN_2096191 1512.418778
ILMN_2157219 284.6628398
ILMN_1703743 1359.143795
ILMN_1687609 80.04343866

Total number of rows: 16378

Table truncated, full table size 398 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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