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Sample GSM398023 Query DataSets for GSM398023
Status Public on Apr 28, 2009
Title GBM_Cell Line_4
Sample type RNA
 
Source name GBM
Organism Homo sapiens
Characteristics cell line: GBM
Treatment protocol Full details of the cell lines culture prior RNA extraction have been described by Fael Al-Mayhani et al, 2009
Growth protocol GBM cell lines were derived from excised GBM tumours and cultured under serum-free conditions with EGF and FGF. Full details of the derivation and culture protocol have been described by Fael Al-Mayhani et al, 2009
Extracted molecule total RNA
Extraction protocol RNA was extracted using Qiagen RNAeasy kit
Label Cy3
Label protocol Cy3
 
Hybridization protocol Standard Illumina hybridization protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Scan protocol Standard Illumina scan protocol by Centre for Microarray Resources at the department of Pathology of the University of Cambridge, UK
Description none
Data processing Robust spline normalization
 
Submission date Apr 27, 2009
Last update date Apr 27, 2009
Contact name Talal M. Fael Al-Mayhani
Phone 01223-331160
Fax 01223-331174
Organization name University of Cambridge
Department Clinical Neurosciences
Street address Forvie Site, Robinson Way
City Cambridge
State/province Cambridgeshire
ZIP/Postal code CB2 0PY
Country United Kingdom
 
Platform ID GPL6883
Series (1)
GSE15846 GBM cell lines derived and propagated according to Cambridge protocol

Data table header descriptions
ID_REF
VALUE robust spline normalization

Data table
ID_REF VALUE
ILMN_1809034 221.6597537
ILMN_1660305 425.4265116
ILMN_2055271 81.9209281
ILMN_1787689 62.40228557
ILMN_1745607 3529.009882
ILMN_1735045 57.11126284
ILMN_1680754 64.95603282
ILMN_1755321 255.9278532
ILMN_1698554 382.306598
ILMN_2061446 219.4559735
ILMN_2270015 58.16646458
ILMN_1653165 395.9485239
ILMN_1662364 14953.98314
ILMN_1700461 859.8299081
ILMN_1674698 433.2429752
ILMN_1784269 442.5353162
ILMN_2096191 2030.036489
ILMN_2157219 388.4000398
ILMN_1703743 1718.19629
ILMN_1687609 66.34336825

Total number of rows: 16378

Table truncated, full table size 398 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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