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GEO accession:
Sample GSM39099
Query DataSets for GSM39099
Status
Public on Jan 20, 2005
Title
Lentinula edodes - parent B of strain L54
Sample type
SAGE
Anchor
NlaIII
Tag Count
4233
Tag Length
10
Source name
Parent B of L54 at dikaryotic mycelium grown on sawdust
Organism
Lentinula edodes
Extracted molecule
total RNA
Description
Gene expression profile at dikaryotic mycelial stage of parent B of L54 grown on sawdust.
Submission date
Jan 19, 2005
Last update date
Nov 19, 2008
Contact name
Hoi Shan Kwan
E-mail(s)
hoishankwan@cuhk.edu.hk
Phone
852-2609-6270
Organization name
The Chinese University of Hong Kong
Department
Biology
Street address
City
Shatin
State/province
Hong Kong SAR
ZIP/Postal code
N.T.
Country
China
Platform ID
GPL1457
Series (1)
GSE2167
Development stages of Lentinula edodes
Data table header descriptions
TAG
10 bp SAGE tag;
COUNT
Number of each SAGE tag
TPM
tags per million
Data table
TAG
COUNT
TPM
GAAGACGAAA
66
15591.78
TATTCCAGCT
53
12520.67
CCTGTTTGAG
49
11575.71
CCACTAGTTG
38
8977.08
GGACAATTGT
36
8504.61
ATCGCTCGTC
20
4724.78
ACATCTTGGG
19
4488.54
AAAAAAAAAA
16
3779.83
TAGCTGGTCG
16
3779.83
TCGGCAGACG
15
3543.59
CACCCTAAGG
14
3307.35
GGTGCATCCT
14
3307.35
TACCCCACTG
14
3307.35
CATTCAAGCC
13
3071.11
GCACCATCAA
13
3071.11
GCCCCTGCAC
13
3071.11
GTAAAGCCGC
13
3071.11
TACTCTGGGT
13
3071.11
TACCCGGGTT
12
2834.87
TACTATGTAC
12
2834.87
Total number of rows:
2702
Table truncated, full table size
52 Kbytes
.
Supplementary data files not provided
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