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GEO accession:
Sample GSM39098
Query DataSets for GSM39098
Status
Public on Jan 20, 2005
Title
Lentinula edodes - Parent A of strain L54
Sample type
SAGE
Anchor
NlaIII
Tag Count
4760
Tag Length
10
Source name
Dikaryotic mycelium of parent A of Lentinula edodes L54 grown on sawdust
Organism
Lentinula edodes
Extracted molecule
total RNA
Description
Gene expression profile at dikaryotic mycelial stage of parent A of L54 grown on sawdust.
Submission date
Jan 19, 2005
Last update date
Nov 19, 2008
Contact name
Hoi Shan Kwan
E-mail(s)
hoishankwan@cuhk.edu.hk
Phone
852-2609-6270
Organization name
The Chinese University of Hong Kong
Department
Biology
Street address
City
Shatin
State/province
Hong Kong SAR
ZIP/Postal code
N.T.
Country
China
Platform ID
GPL1457
Series (1)
GSE2167
Development stages of Lentinula edodes
Data table header descriptions
TAG
10 bp SAGE tag;
COUNT
number of each SAGE tag
TPM
tags per million
Data table
TAG
COUNT
TPM
CCTGTTTGAG
121
25420.17
GGTGTACAAT
61
12815.13
TAGTAGTAAC
44
9243.70
AATAACGGCT
32
6722.69
GTTTCTTGGT
32
6722.69
ACATCTTGGG
31
6512.61
CAATAAATGT
31
6512.61
AAAAAAAAAA
23
4831.93
ATTTTATCTG
23
4831.93
TCGGCAGACG
23
4831.93
CGCTTAGGTT
22
4621.85
TGAACAGAGG
22
4621.85
ATTTTGTTCC
17
3571.43
TAGTTTTCAA
16
3361.34
TTCCCATAAG
16
3361.34
TGTAAATAAC
15
3151.26
TGTACCCAAA
15
3151.26
ATTGCGAGCG
14
2941.18
CAAGATACCC
14
2941.18
TTGTATGATC
14
2941.18
Total number of rows:
2908
Table truncated, full table size
56 Kbytes
.
Supplementary data files not provided
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