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Sample GSM3828 Query DataSets for GSM3828
Status Public on Jul 05, 2003
Title BW5147 thymoma
Sample type SAGE
Anchor NlaIII
Tag Count 19605
Tag Length 10
 
Source name Mouse thymoma line BW (TCR alpha/beta negative)
Organism Mus musculus
Extracted molecule total RNA
 
Description Thymoma line BW 5147 from AKR/J mice. This is a cloned subline that is negative for TCR alpha/beta expression and is HPRT negative.
 
Submission date Feb 04, 2003
Last update date Nov 19, 2008
Contact name Steve Cobbold
E-mail(s) stephen.cobbold@path.ox.ac.uk
Phone +44-(0)1865-275504
Fax +44-(0)1865-275501
URL http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name University of Oxford
Department Sir William Dunn School of Pathology
Lab Therapeutic Immunology Group
Street address South Parks Road
City Oxford
State/province Oxfordshire
ZIP/Postal code OX1 3RE
Country United Kingdom
 
Platform ID GPL11
Series (1)
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals

Data table header descriptions
TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million

Data table
TAG COUNT TPM
GTGGCTCACA 1552 79163.48
TGCCAAGGGT 632 32236.67
ATTCTCCAGT 489 24942.62
TGGTTGCTGG 191 9742.41
GATACTTGGA 168 8569.24
TTATCAAGTG 151 7702.12
CGCTGGTTCC 129 6579.95
TGAAAAGGAA 98 4998.72
CCCTGAGTCC 92 4692.68
CGCCGCCGGC 87 4437.64
TGGTGACAAA 87 4437.64
GTGGCTTACA 75 3825.55
GCGGCGGATG 64 3264.47
AGGCAGACAG 61 3111.45
CAGATCTTCG 61 3111.45
GTGGCTCATA 56 2856.41
TTATATAGTG 56 2856.41
CGACGAGCAC 53 2703.39
GCTGCCCTCC 53 2703.39
TGTGCCAAGT 52 2652.38

Total number of rows: 8083

Table truncated, full table size 152 Kbytes.




Supplementary data files not provided

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