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Sample GSM38097 Query DataSets for GSM38097
Status Public on Jan 15, 2005
Title Skin - 8244
Sample type RNA
 
Source name Skin
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 15
Pathological T: 1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1
Pathological Grade: 1
Primary Site: Skin of arm
Histology: Squamous cell carcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1539.5 P 0.000147
AFFX-BioB-M_at 2558.6 P 0.000044
AFFX-BioB-3_at 1333.6 P 0.000044
AFFX-BioC-5_at 4188.7 P 0.000044
AFFX-BioC-3_at 5563.2 P 0.000044
AFFX-BioDn-5_at 10000.3 P 0.000044
AFFX-BioDn-3_at 19439 P 0.000052
AFFX-CreX-5_at 46858.9 P 0.000052
AFFX-CreX-3_at 56735.2 P 0.000044
AFFX-DapX-5_at 1316.2 P 0.000052
AFFX-DapX-M_at 2421.5 P 0.000581
AFFX-DapX-3_at 3813.5 P 0.000052
AFFX-LysX-5_at 219.5 P 0.000297
AFFX-LysX-M_at 406.7 P 0.002023
AFFX-LysX-3_at 464.6 P 0.00006
AFFX-PheX-5_at 291.1 P 0.000169
AFFX-PheX-M_at 481.7 P 0.000127
AFFX-PheX-3_at 412.9 P 0.000052
AFFX-ThrX-5_at 362.1 P 0.00006
AFFX-ThrX-M_at 580 P 0.00006

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM38097.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table
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