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Sample GSM38095 Query DataSets for GSM38095
Status Public on Jan 15, 2005
Title Omentum - 8240
Sample type RNA
 
Source name Ovary
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Prior Therapy: Chemotherapy
Prior Therapy: Hormonal Treatment
Prior Therapy: Radiation
Prior Therapy: Surgical
Relapse Since Primary Treatment: Yes
Number of Years Until Relapse: 11-15
Mammogram: Yes
Number of years in which a mammogram was obtained?: 11-15
Oophorectomy?: No
Fibrocystic disease?: No
Mammogram calcifications?: No
Retreatment T: X
Retreatment N: X
Retreatment M: 1
Retreatment Metastatic Sites: Peritoneum
Retreatment Stage: 4
Retreatment Grade: 3
Retreatment ER: Positive
Retreatment PR: Positive
Primary Site: Breast
Histology: Metastatic Lobular Carcinoma
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 686.6 P 0.000754
AFFX-BioB-M_at 975 P 0.00011
AFFX-BioB-3_at 517.4 P 0.00007
AFFX-BioC-5_at 1795.3 P 0.000044
AFFX-BioC-3_at 2548.5 P 0.000044
AFFX-BioDn-5_at 4855.8 P 0.000044
AFFX-BioDn-3_at 8979.9 P 0.000052
AFFX-CreX-5_at 22237.1 P 0.000044
AFFX-CreX-3_at 27636.4 P 0.000044
AFFX-DapX-5_at 823.6 P 0.000052
AFFX-DapX-M_at 1772.4 P 0.000662
AFFX-DapX-3_at 2365 P 0.000052
AFFX-LysX-5_at 129.2 P 0.000509
AFFX-LysX-M_at 240.6 P 0.020022
AFFX-LysX-3_at 430.1 P 0.000224
AFFX-PheX-5_at 207.3 P 0.00007
AFFX-PheX-M_at 259.8 P 0.001248
AFFX-PheX-3_at 331 P 0.000972
AFFX-ThrX-5_at 307.3 P 0.000662
AFFX-ThrX-M_at 419.8 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM38095.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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