NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM38088 Query DataSets for GSM38088
Status Public on Jan 15, 2005
Title Ovary - 8226
Sample type RNA
 
Source name Ovary
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.7
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 0-5
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 34
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Pathological T: 3c
Pathological N: 0
Pathological M: 0
Pathological Stage: 3C
Pathological Grade: 3
Primary Site: Ovary
Histology: Papillary Serous Carcinoma
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1048.2 P 0.000297
AFFX-BioB-M_at 1466.5 P 0.000044
AFFX-BioB-3_at 787.9 P 0.000044
AFFX-BioC-5_at 3281.9 P 0.000044
AFFX-BioC-3_at 4496.3 P 0.000044
AFFX-BioDn-5_at 8108 P 0.000044
AFFX-BioDn-3_at 15370.2 P 0.000044
AFFX-CreX-5_at 29500 P 0.000052
AFFX-CreX-3_at 37318 P 0.000044
AFFX-DapX-5_at 1031.9 P 0.000052
AFFX-DapX-M_at 1758.8 P 0.000509
AFFX-DapX-3_at 2258.4 P 0.000052
AFFX-LysX-5_at 153.7 P 0.000662
AFFX-LysX-M_at 245.6 P 0.020022
AFFX-LysX-3_at 307.9 P 0.000857
AFFX-PheX-5_at 177.4 P 0.00007
AFFX-PheX-M_at 242.2 P 0.000258
AFFX-PheX-3_at 374.3 P 0.00034
AFFX-ThrX-5_at 290.7 P 0.000081
AFFX-ThrX-M_at 442.2 P 0.00011

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM38088.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap