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Sample GSM38056 Query DataSets for GSM38056
Status Public on Jan 15, 2005
Title Spleen - 2475
Sample type RNA
 
Source name Spleen
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Prior Therapy: Chemotherapy
Prior Therapy: Surgical
Relapse Since Primary Treatment: Yes
Number of Years Until Relapse: 0-5
Presenting Symptoms: Abdominal mass
Retreatment T: 3c
Retreatment N: X
Retreatment M: X
Retreatment Stage: Unknown
Retreatment Grade: X
Primary Site: Ovary
Histology: Carcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 751.5 P 0.000297
AFFX-BioB-M_at 1110.5 P 0.000044
AFFX-BioB-3_at 633.2 P 0.000052
AFFX-BioC-5_at 2386.3 P 0.000052
AFFX-BioC-3_at 2931.3 P 0.000044
AFFX-BioDn-5_at 5702.7 P 0.000044
AFFX-BioDn-3_at 9432.5 P 0.000044
AFFX-CreX-5_at 24675.1 P 0.000044
AFFX-CreX-3_at 33158.8 P 0.000044
AFFX-DapX-5_at 544.5 P 0.00006
AFFX-DapX-M_at 1184.9 P 0.000857
AFFX-DapX-3_at 1519.3 P 0.000044
AFFX-LysX-5_at 72.9 P 0.00844
AFFX-LysX-M_at 48 A 0.327079
AFFX-LysX-3_at 171.6 P 0.000662
AFFX-PheX-5_at 94.8 P 0.002867
AFFX-PheX-M_at 155.1 P 0.004998
AFFX-PheX-3_at 222.8 P 0.003595
AFFX-ThrX-5_at 198.8 P 0.000581
AFFX-ThrX-M_at 210.1 P 0.000446

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM38056.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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