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Sample GSM38053 Query DataSets for GSM38053
Status Public on Jan 15, 2005
Title Prostate - 2047
Sample type RNA
 
Source name Prostate Gland
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 106
PSA: Elevated
# of years PSA Tested?: 0-5
Cancer discovered by digital exam?: No
Current status of disease: Under Therapy
Pathological T: 2a
Pathological N: 0
Pathological M: 0
Pathological Stage: 2
Pathological Grade: 3
Pathological Gleason Score: 7
Primary Site: Prostate
Histology: Adenocarcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 988.2 P 0.000662
AFFX-BioB-M_at 1447.9 P 0.000044
AFFX-BioB-3_at 868.4 P 0.000044
AFFX-BioC-5_at 3277.9 P 0.000044
AFFX-BioC-3_at 4579 P 0.000044
AFFX-BioDn-5_at 8876.7 P 0.000044
AFFX-BioDn-3_at 14355.4 P 0.000044
AFFX-CreX-5_at 27997 P 0.000052
AFFX-CreX-3_at 34122.6 P 0.000044
AFFX-DapX-5_at 1178.7 P 0.000044
AFFX-DapX-M_at 2530.4 P 0.000662
AFFX-DapX-3_at 3098.9 P 0.000052
AFFX-LysX-5_at 164.6 P 0.000509
AFFX-LysX-M_at 259.2 P 0.003212
AFFX-LysX-3_at 495 P 0.00006
AFFX-PheX-5_at 249.4 P 0.00007
AFFX-PheX-M_at 315.6 P 0.000127
AFFX-PheX-3_at 320.8 P 0.000044
AFFX-ThrX-5_at 432.2 P 0.000195
AFFX-ThrX-M_at 701.1 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM38053.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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