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Sample GSM38052 Query DataSets for GSM38052
Status Public on Jan 15, 2005
Title Corpus Uteri - 2045
Sample type RNA
 
Source name Corpus Uteri
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: 0-5
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 16
Hormonal therapy (# of Years)?: 0-5
Pathological T: 4
Pathological N: 1
Pathological M: 1
Pathological Metastatic Sites: Pulmonary
Pathological Stage: 4B
Pathological Grade: X
Primary Site: Corpus Uteri
Histology: Serous adenocarcinoma (papillary serous)
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 893.4 P 0.000195
AFFX-BioB-M_at 1422 P 0.000044
AFFX-BioB-3_at 717.9 P 0.000044
AFFX-BioC-5_at 2998.9 P 0.000052
AFFX-BioC-3_at 3795.5 P 0.000044
AFFX-BioDn-5_at 7660.2 P 0.000044
AFFX-BioDn-3_at 12422.4 P 0.000044
AFFX-CreX-5_at 32501.4 P 0.000052
AFFX-CreX-3_at 44084.5 P 0.000044
AFFX-DapX-5_at 1178.4 P 0.00007
AFFX-DapX-M_at 2244 P 0.000581
AFFX-DapX-3_at 3213 P 0.000044
AFFX-LysX-5_at 211.4 P 0.000169
AFFX-LysX-M_at 230.4 P 0.006187
AFFX-LysX-3_at 465.6 P 0.000095
AFFX-PheX-5_at 311.1 P 0.000044
AFFX-PheX-M_at 414.9 P 0.000044
AFFX-PheX-3_at 395.3 P 0.00006
AFFX-ThrX-5_at 296.9 P 0.000662
AFFX-ThrX-M_at 570 P 0.000052

Total number of rows: 54675

Table truncated, full table size 1448 Kbytes.




Supplementary file Size Download File type/resource
GSM38052.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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