|
Status |
Public on Jul 06, 2012 |
Title |
DTCs (bone marrow aspirates) from Patient 8 (4424556027_B) |
Sample type |
RNA |
|
|
Source name |
DTCs (bone marrow aspirates) from Patient 8
|
Organism |
Homo sapiens |
Characteristics |
cell type: disseminated tumour cells disease: breast cancer
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was isolated using Qiagen (Germantown, MD) AllPrep DNA/RNA/Protein extraction kits
|
Label |
biotin
|
Label protocol |
Illumina's protocol
|
|
|
Hybridization protocol |
Illumina's protocol
|
Scan protocol |
Illumina's protocol
|
Description |
n/a
|
Data processing |
Image data were processed by BeadStudio software using background subtraction and Quantile normalization. The methods to adjust the normalized intensity values see MAQC Consortium’s description [PMID: 16964229]. Log2 expression ratio of an intensity value to the average signal in all samples for each transcript was calculated.
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|
|
Submission date |
Feb 10, 2009 |
Last update date |
Jul 06, 2012 |
Contact name |
Dong-Yu Wang |
Organization name |
UHN-PMH-OCI
|
Street address |
610 University Ave
|
City |
Toronto |
ZIP/Postal code |
M5G 2M9 |
Country |
Canada |
|
|
Platform ID |
GPL6883 |
Series (1) |
GSE14776 |
Mechanisms and pathways of bone metastasis: challenges and pitfalls of performing molecular research on patient samples |
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