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GEO accession:
Sample GSM364550
Query DataSets for GSM364550
Status
Public on Jun 19, 2009
Title
human_CD36_2
Sample type
genomic
Source name
CD36+ cell
Organism
Homo sapiens
Characteristics
cell type: CD36+
Treatment protocol
Treatment protocol as described in Cui et al., 2009
Growth protocol
Growth protocol as described in Cui et al., 2009
Extracted molecule
genomic DNA
Extraction protocol
Extract protocol as described in Cui et al., 2009
Label
biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
none
Data processing
Affymetrix MAS5 algorithm.
Submission date
Jan 26, 2009
Last update date
Aug 28, 2018
Contact name
Chongzhi Zang
Organization name
University of Virginia
Street address
P. O. Box 800717
City
Charlottesville
State/province
VA
ZIP/Postal code
22908
Country
USA
Platform ID
GPL570
Series (1)
GSE12646
Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
663.394
P
0.000509415
AFFX-BioB-M_at
1164.31
P
4.42873e-05
AFFX-BioB-3_at
721.842
P
9.4506e-05
AFFX-BioC-5_at
2897.9
P
5.16732e-05
AFFX-BioC-3_at
3399.98
P
5.16732e-05
AFFX-BioDn-5_at
6653.17
P
4.42873e-05
AFFX-BioDn-3_at
13000.7
P
7.00668e-05
AFFX-CreX-5_at
37303.5
P
5.16732e-05
AFFX-CreX-3_at
49316.9
P
4.42873e-05
AFFX-DapX-5_at
1053.71
P
9.4506e-05
AFFX-DapX-M_at
2300.93
P
0.000856509
AFFX-DapX-3_at
2394.4
P
0.000126798
AFFX-LysX-5_at
155.474
P
0.000224668
AFFX-LysX-M_at
233.353
P
0.0464816
AFFX-LysX-3_at
308.395
P
4.42873e-05
AFFX-PheX-5_at
143.423
P
0.00499819
AFFX-PheX-M_at
204.751
P
0.0113844
AFFX-PheX-3_at
240.739
P
0.0020226
AFFX-ThrX-5_at
306.554
P
5.16732e-05
AFFX-ThrX-M_at
446.498
P
4.42873e-05
Total number of rows:
54675
Table truncated, full table size
1629 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM364550.CEL.gz
5.1 Mb
(ftp)
(http)
CEL
GSM364550.CHP.gz
293.9 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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