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Sample GSM359324 Query DataSets for GSM359324
Status Public on Dec 01, 2012
Title Serum_AbNH_7467
Sample type RNA
 
Source name PBMC
Organism Homo sapiens
Characteristics Antibody Negative
IL-1Ra High
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using Qiagen RNeasy minikit
Label Cy3
Label protocol Total RNA (200 ng) was coverted into biotin labeled cRNA using Target Amp cDNA synthesis kit (Epicenter catalog no. TAB1R6924).
 
Hybridization protocol Approximately 750ng of labeled cRNA was fragmented, and hybridized to the Illumina HumanRef-8 v3.0 beadchips in accordance to the Illumina technical manual. RNA from each culture was independently analyzed.
Scan protocol After hybridization, arrays were washed, stained with Cy3-conjugated streptavidin, and scanned. Image data were analyzed with BeadStudio V2.0.
Description SAH7467
Data processing The raw data were normalized using Robust Spline Normalization.
 
Submission date Jan 09, 2009
Last update date Dec 01, 2012
Contact name Jin-Xiong She
E-mail(s) jshe@gru.edu
Phone 706-721-3410
Fax 706-721-3688
URL http://www.cbgm.mcg.edu/
Organization name Medical College of Georgia
Department Center for Biotechnology and Genomic Medicine
Street address 1120 15th Street, CA4124
City Augusta
State/province GA
ZIP/Postal code 30912-2400
Country USA
 
Platform ID GPL6883
Series (1)
GSE14368 The anti-inflammatory IL-1 receptor antagonist (IL-1ra) protects against the development of islet autoimmunity.

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
ILMN_1802380 10.90029825
ILMN_1792389 7.445606015
ILMN_2375156 7.906542156
ILMN_1697642 9.466082424
ILMN_1681845 11.57791117
ILMN_1690979 7.647420092
ILMN_1811114 7.431857991
ILMN_1660729 7.434550404
ILMN_2129572 12.30453669
ILMN_1705659 7.315429917
ILMN_1797055 7.788612193
ILMN_1670547 7.382851257
ILMN_2342515 8.694553322
ILMN_1800425 10.6723436
ILMN_1783852 11.8737512
ILMN_1721344 11.28362573
ILMN_1679973 7.584424853
ILMN_1701854 11.89289173
ILMN_1678707 12.26079616
ILMN_2276504 7.438899813

Total number of rows: 24526

Table truncated, full table size 596 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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