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Sample GSM352228 Query DataSets for GSM352228
Status Public on May 18, 2010
Title LnCaP cells treated with R1881 for 12 hours
Sample type RNA
 
Channel 1
Source name R1881 treated cells - 12hr
Organism Homo sapiens
Characteristics LnCaP cells
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol following manufacturer's instructions
Label Cy5
Label protocol Agilent labeling protocol
 
Channel 2
Source name untreated cells
Organism Homo sapiens
Characteristics LnCaP cells
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol following manufacturer's instructions
Label Cy3
Label protocol Agilent labeling protocol
 
 
Hybridization protocol Agilent hyb protocol
Scan protocol Agilent scanner
Images were quantified using Genepix6.0
Description time-course analysis of androgen treatment in LNCaP cells
time-course 3 of 5 of R1881 expression
Data processing Feature Extraction, Agilent
 
Submission date Dec 17, 2008
Last update date May 18, 2010
Contact name Jindan Yu
E-mail(s) jindan-yu@northwestern.edu
Organization name Northwestern University
Department Medicine - Hem/Onc
Lab Yu
Street address 303 E. Superior St.
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL4133
Series (2)
GSE14028 An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (I)
GSE14097 An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression

Data table header descriptions
ID_REF
VALUE log10 ratio treated/control

Data table
ID_REF VALUE
1 8.22E-01
2 0.00E+00
3 0.00E+00
4 0.00E+00
5 0.00E+00
6 0.00E+00
7 0.00E+00
8 0.00E+00
9 0.00E+00
10 0.00E+00
11 0.00E+00
12 7.56E-02
13 0.00E+00
14 -4.16E-02
15 0.00E+00
16 2.12E-01
17 4.37E-01
18 1.85E-01
19 -6.23E-02
20 -9.81E-02

Total number of rows: 45015

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM352228.txt.gz 14.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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