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Sample GSM343899 Query DataSets for GSM343899
Status Public on Dec 15, 2008
Title hMSCs ctrl_1
Sample type RNA
Source name Human primary bone marrow mesenchymal stromal cells
Organism Homo sapiens
Characteristics Patient 294
Female 69 years old
Obtained after informed consent during orthopedia hip surgery
Protocol approved by ethics committee of the Montreal Jewish General Hospital
Biomaterial provider Our laboratory
Treatment protocol Untreated
Growth protocol Growth in MEM alpha medium with 20% FBS, passaged q 3 days.
Extracted molecule total RNA
Extraction protocol Cells homogenized with Qiashredder homogenizer, RNA extracted with RNeasy Mini Kit. RNA verified with NanoDrop ND-1000, Agilent RNA 6000 Nano Assay and agarose electrophoresis.
Label Cy5
Label protocol AminoAllyl aRNA labeling. The reactive amino group of 5-(3-aminoallyl)-UTP/5-(3-aminoallyl)-dUTP was used to conjugate the purified aRNA with the NHS-CyDye.
Hybridization protocol Phalanx Hybridization Protocol
Scan protocol Phalanx scanning protocol
Description Control cells
Data processing Quantile normalization
Submission date Nov 19, 2008
Last update date Nov 21, 2008
Contact name Philippe M Campeau
Organization name Baylor College of Medicine
Department Molecular and Human Genetics
Lab Brendan Lee Lab
Street address 1 Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
Platform ID GPL6254
Series (1)
GSE13675 Conduritol B Epoxide treatment of MSCs and 293T cells

Data table header descriptions
VALUE Intensity

Data table
PH_hs_0005606 28
PH_hs_0028995 28
PH_hs_0008748 61
PH_hs_0010114 61
PH_hs_0011998 61
PH_hs_0014148 61
PH_hs_0018764 61
PH_hs_0025601 61
PH_hs_0025703 61
PH_hs_0027347 61
PH_hs_0027789 61
PH_hs_0032880 61
PH_hs_0035438 61
PH_hs_0037910 61
PH_hs_0000175 66
PH_hs_0000620 66
PH_hs_0003936 66
PH_hs_0005495 66
PH_hs_0015421 66
PH_hs_0019420 66

Total number of rows: 10298

Table truncated, full table size 206 Kbytes.

Supplementary file Size Download File type/resource
GSM343899.gpr.gz 2.5 Mb (ftp)(http) GPR
Processed data included within Sample table

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