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Sample GSM343894 Query DataSets for GSM343894
Status Public on Dec 15, 2008
Title 293T cells ctrl_2
Sample type RNA
Source name 293T cells
Organism Homo sapiens
Characteristics Human Embryonic Kidney 293 cells which also contains the SV40 Large T-antigen.
Treatment protocol untreated
Growth protocol Growth in DMEM HG medium, passaged q 2 days.
Extracted molecule total RNA
Extraction protocol Cells homogenized with Qiashredder homogenizer, RNA extracted with RNeasy Mini Kit. RNA verified with NanoDrop ND-1000, Agilent RNA 6000 Nano Assay and agarose electrophoresis.
Label Cy5
Label protocol AminoAllyl aRNA labeling. The reactive amino group of 5-(3-aminoallyl)-UTP/5-(3-aminoallyl)-dUTP was used to conjugate the purified aRNA with the NHS-CyDye.
Hybridization protocol Phalanx Hybridization Protocol
Scan protocol Phalanx scanning protocol
Description Control cells
Data processing Quantile normalization
Submission date Nov 19, 2008
Last update date Nov 21, 2008
Contact name Philippe M Campeau
Organization name Baylor College of Medicine
Department Molecular and Human Genetics
Lab Brendan Lee Lab
Street address 1 Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
Platform ID GPL6254
Series (1)
GSE13675 Conduritol B Epoxide treatment of MSCs and 293T cells

Data table header descriptions
VALUE Intensity

Data table
PH_hs_0022502 3.25
PH_hs_0013057 8.75
PH_hs_0040896 8.75
PH_hs_0019960 20.25
PH_hs_0027814 20.75
PH_hs_0024076 22.75
PH_hs_0006578 26
PH_hs_0031207 26
PH_hs_0035004 26
PH_hs_0018435 28.5
PH_hs_0023877 28.5
PH_hs_0014963 29.75
PH_hs_0026192 31.125
PH_hs_0031405 31.125
PH_hs_0008499 33.25
PH_hs_0016004 33.25
PH_hs_0003761 34
PH_hs_0029041 36.25
PH_hs_0027877 37.25
PH_hs_0005630 37.75

Total number of rows: 11222

Table truncated, full table size 225 Kbytes.

Supplementary file Size Download File type/resource
GSM343894.gpr.gz 2.6 Mb (ftp)(http) GPR
Processed data included within Sample table

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