|
| Status |
Public on Dec 31, 2019 |
| Title |
18889 BrKo_ GFP-negativ |
| Sample type |
SRA |
| |
|
| Source name |
brain
|
| Organism |
Mus musculus |
| Characteristics |
genotype/variation: Cxcr4-GFP
population: microglia
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Nugen Ovation SoLo
Qiagen miRNeasy
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 1500 |
| |
|
| Description |
3092
norm_gene_counts_GFP
|
| Data processing |
CASAVA v1.82
STARaligner
DESeq2
|
| |
|
| Submission date |
Oct 01, 2018 |
| Last update date |
Dec 31, 2019 |
| Contact name |
Joachim Schultze |
| E-mail(s) |
j.schultze@uni-bonn.de
|
| Organization name |
LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
|
| Department |
Genomics and Immunoregulation
|
| Street address |
Carl-Troll-Strasse 31
|
| City |
Bonn |
| State/province |
NRW |
| ZIP/Postal code |
53115 |
| Country |
Germany |
| |
|
| Platform ID |
GPL18480 |
| Series (1) |
| GSE120701 |
Developmentally controlled expression of Cxcr4 by hematopoietic progenitors allows tracing of monocyte function in stroke |
|
| Relations |
| BioSample |
SAMN10149833 |
| SRA |
SRX4780611 |
