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Sample GSM3408715 Query DataSets for GSM3408715
Status Public on Dec 31, 2019
Title 18774+18772 BrKo_ GFP-negativ
Sample type SRA
 
Source name brain
Organism Mus musculus
Characteristics genotype/variation: Cxcr4-GFP
population: microglia
Extracted molecule total RNA
Extraction protocol Nugen Ovation SoLo
Qiagen miRNeasy
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 1500
 
Description 2636
norm_gene_counts_GFP
Data processing CASAVA v1.82 
STARaligner
DESeq2
 
Submission date Oct 01, 2018
Last update date Dec 31, 2019
Contact name Joachim Schultze
E-mail(s) j.schultze@uni-bonn.de
Organization name LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
Department Genomics and Immunoregulation
Street address Carl-Troll-Strasse 31
City Bonn
State/province NRW
ZIP/Postal code 53115
Country Germany
 
Platform ID GPL18480
Series (1)
GSE120701 Developmentally controlled expression of Cxcr4 by hematopoietic progenitors allows tracing of monocyte function in stroke
Relations
BioSample SAMN10149837
SRA SRX4780607

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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