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Sample GSM325339 Query DataSets for GSM325339
Status Public on Apr 16, 2009
Title Connective tissue
Sample type RNA
 
Source name Connective tissue tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Connective tissue
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Connective tissue tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 4.474078
AY374473_B 4.583037
AY374473ALT 5.186911
AY374473ALT_B 4.934449
AY374474 5.725564
AY374474_B 5.407521
AY374475 4.255371
AY374475_B 4.379873
AY374477 7.480448
AY374477_B 7.132963
AY374477ALT 6.657108
AY374477ALT_B 6.629318
AY374478 4.998952
AY374478_B 5.128039
AY374478ALT 4.99508
AY374478ALT_B 5.085026
AY374479 4.078545
AY374479_B 4.271603
AY374479ALT 5.746585
AY374479ALT_B 5.624055

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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