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Sample GSM325324 Query DataSets for GSM325324
Status Public on Apr 16, 2009
Title Brain
Sample type RNA
 
Source name Brain tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Brain
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Brain tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 4.378729
AY374473_B 4.167463
AY374473ALT 4.273981
AY374473ALT_B 4.83247
AY374474 4.615827
AY374474_B 4.452277
AY374475 4.616602
AY374475_B 4.801704
AY374477 4.218175
AY374477_B 4.532321
AY374477ALT 4.487538
AY374477ALT_B 3.828049
AY374478 4.079685
AY374478_B 4.344807
AY374478ALT 4.593976
AY374478ALT_B 4.042266
AY374479 4.197509
AY374479_B 3.742498
AY374479ALT 4.524933
AY374479ALT_B 4.737734

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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