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GEO accession:
Sample GSM325314
Query DataSets for GSM325314
Status
Public on Apr 16, 2009
Title
Lung
Sample type
RNA
Source name
Lung tissue of frog
Organism
Xenopus tropicalis
Characteristics
Lung
Extracted molecule
polyA RNA
Extraction protocol
mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label
Cy5 or Cy3
Label protocol
cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
Hybridization protocol
Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol
Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description
Lung tissue of frog
Data processing
Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
Submission date
Sep 29, 2008
Last update date
Apr 16, 2009
Contact name
Esther T Chan
Organization name
Celgene Corporation
Street address
1500 Owens Street, Suite 500
City
San Francisco
State/province
California
ZIP/Postal code
94158
Country
USA
Platform ID
GPL7400
Series (1)
GSE12975
Expression of known and predicted genes in tissues of Xenopus tropicalis (frog)
Data table header descriptions
ID_REF
Unique identifier
VALUE
Arcsinh-transformed normalized intensity.
Data table
ID_REF
VALUE
EnsFrogProbe_1
5.3597795
EnsFrogProbe_2
5.602997
EnsFrogProbe_3
5.541057
EnsFrogProbe_4
5.2887055
EnsFrogProbe_5
5.3452685
EnsFrogProbe_6
5.6906305
EnsFrogProbe_7
5.3593965
EnsFrogProbe_8
4.4805485
EnsFrogProbe_9
4.506555
EnsFrogProbe_10
4.71897
EnsFrogProbe_11
4.5947245
EnsFrogProbe_12
4.150549
EnsFrogProbe_13
4.664548
EnsFrogProbe_14
4.600317
EnsFrogProbe_15
4.637168
EnsFrogProbe_16
4.2939895
EnsFrogProbe_17
4.57882
EnsFrogProbe_18
6.3262075
EnsFrogProbe_19
5.99804
EnsFrogProbe_20
6.27309
Total number of rows:
41523
Table truncated, full table size
1133 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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