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GEO accession:
Sample GSM325307
Query DataSets for GSM325307
Status
Public on Apr 16, 2009
Title
Fat body
Sample type
RNA
Source name
Fat body tissue of frog
Organism
Xenopus tropicalis
Characteristics
Fat body
Extracted molecule
polyA RNA
Extraction protocol
mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label
Cy5 or Cy3
Label protocol
cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
Hybridization protocol
Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol
Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description
Fat body tissue of frog
Data processing
Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
Submission date
Sep 29, 2008
Last update date
Apr 16, 2009
Contact name
Esther T Chan
Organization name
Celgene Corporation
Street address
1500 Owens Street, Suite 500
City
San Francisco
State/province
California
ZIP/Postal code
94158
Country
USA
Platform ID
GPL7400
Series (1)
GSE12975
Expression of known and predicted genes in tissues of Xenopus tropicalis (frog)
Data table header descriptions
ID_REF
Unique identifier
VALUE
Arcsinh-transformed normalized intensity.
Data table
ID_REF
VALUE
EnsFrogProbe_1
5.96995
EnsFrogProbe_2
5.90102
EnsFrogProbe_3
6.3022285
EnsFrogProbe_4
5.6456335
EnsFrogProbe_5
6.086476
EnsFrogProbe_6
6.2695975
EnsFrogProbe_7
6.123974
EnsFrogProbe_8
3.818701
EnsFrogProbe_9
3.5934735
EnsFrogProbe_10
3.8276165
EnsFrogProbe_11
3.5300715
EnsFrogProbe_12
4.489319
EnsFrogProbe_13
3.9273845
EnsFrogProbe_14
4.231604
EnsFrogProbe_15
4.137186
EnsFrogProbe_16
3.993415
EnsFrogProbe_17
4.2362275
EnsFrogProbe_18
6.922863
EnsFrogProbe_19
4.9255635
EnsFrogProbe_20
5.4391145
Total number of rows:
41523
Table truncated, full table size
1133 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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