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GEO accession:
Sample GSM325303
Query DataSets for GSM325303
Status
Public on Apr 16, 2009
Title
Brain
Sample type
RNA
Source name
Brain tissue of frog
Organism
Xenopus tropicalis
Characteristics
Brain
Extracted molecule
polyA RNA
Extraction protocol
mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label
Cy5 or Cy3
Label protocol
cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
Hybridization protocol
Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol
Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description
Brain tissue of frog
Data processing
Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
Submission date
Sep 29, 2008
Last update date
Apr 16, 2009
Contact name
Esther T Chan
Organization name
Celgene Corporation
Street address
1500 Owens Street, Suite 500
City
San Francisco
State/province
California
ZIP/Postal code
94158
Country
USA
Platform ID
GPL7400
Series (1)
GSE12975
Expression of known and predicted genes in tissues of Xenopus tropicalis (frog)
Data table header descriptions
ID_REF
Unique identifier
VALUE
Arcsinh-transformed normalized intensity.
Data table
ID_REF
VALUE
EnsFrogProbe_1
4.8718265
EnsFrogProbe_2
4.8077295
EnsFrogProbe_3
4.9281835
EnsFrogProbe_4
4.7786845
EnsFrogProbe_5
4.7274715
EnsFrogProbe_6
4.8927055
EnsFrogProbe_7
5.0503405
EnsFrogProbe_8
4.168459
EnsFrogProbe_9
4.499438
EnsFrogProbe_10
4.388045
EnsFrogProbe_11
4.221859
EnsFrogProbe_12
4.3614295
EnsFrogProbe_13
4.623124
EnsFrogProbe_14
4.5054985
EnsFrogProbe_15
4.1296695
EnsFrogProbe_16
4.2424275
EnsFrogProbe_17
4.247942
EnsFrogProbe_18
5.647231
EnsFrogProbe_19
6.1838785
EnsFrogProbe_20
6.9054775
Total number of rows:
41523
Table truncated, full table size
1133 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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