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Sample GSM317687 Query DataSets for GSM317687
Status Public on Sep 04, 2008
Title depression, BA10-48
Sample type RNA
 
Source name depression
Organism Homo sapiens
Characteristics prefrontal cortex (BA10)
depression
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Biotin-labeled cRNA sample was hybridized according to manufacture's instruction.
Scan protocol Hybridization signal on the chip was scanned using an HP GeneArray scanner (Hewlett-Packard).
Description Gene expression data in human prefromtal cortex
Data processing The data were normalized by median centering by GeneSpring software (Agilent).
 
Submission date Sep 03, 2008
Last update date Mar 16, 2009
Contact name Kazuya Iwamoto
E-mail(s) kaziwamoto@brain.riken.jp
Phone +81-48-467-6949
Fax +81-48-467-6947
URL http://www.brain.riken.go.jp/labs/mdmd/indexe.htm
Organization name RIKEN
Department Brain Science Institute
Lab Lab for Molecular Dynamics of Mental Disorders
Street address 2-1 Hirosawa
City Wako
ZIP/Postal code 351-0198
Country Japan
 
Platform ID GPL8300
Series (1)
GSE12654 Gene expression from human prefrontal cortex (BA10)

Data table header descriptions
ID_REF
VALUE The value was obtained by median centering.

Data table
ID_REF VALUE
100_g_at 4.786207199
1000_at 16.10000038
1001_at 0.693103433
1002_f_at 0.096551724
1003_s_at 0.217241392
1004_at 1.113793015
1005_at 3.748275757
1006_at 0.334482759
1007_s_at 17.18275833
1008_f_at 3.110344648
1009_at 31.99310303
101_at 2
1010_at 0.537931025
1011_s_at 7.96896553
1012_at 0.251724154
1013_at 0.08275862
1014_at 4.641379356
1015_s_at 1.962069035
1016_s_at 0.127586201
1017_at 1.741379261

Total number of rows: 12625

Table truncated, full table size 259 Kbytes.




Supplementary file Size Download File type/resource
GSM317687.CEL.gz 2.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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