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Sample GSM317678 Query DataSets for GSM317678
Status Public on Sep 04, 2008
Title depression, BA10-39
Sample type RNA
 
Source name depression
Organism Homo sapiens
Characteristics prefrontal cortex (BA10)
depression
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Biotin-labeled cRNA sample was hybridized according to manufacture's instruction.
Scan protocol Hybridization signal on the chip was scanned using an HP GeneArray scanner (Hewlett-Packard).
Description Gene expression data in human prefromtal cortex
Data processing The data were normalized by median centering by GeneSpring software (Agilent).
 
Submission date Sep 03, 2008
Last update date Mar 16, 2009
Contact name Kazuya Iwamoto
E-mail(s) kaziwamoto@brain.riken.jp
Phone +81-48-467-6949
Fax +81-48-467-6947
URL http://www.brain.riken.go.jp/labs/mdmd/indexe.htm
Organization name RIKEN
Department Brain Science Institute
Lab Lab for Molecular Dynamics of Mental Disorders
Street address 2-1 Hirosawa
City Wako
ZIP/Postal code 351-0198
Country Japan
 
Platform ID GPL8300
Series (1)
GSE12654 Gene expression from human prefrontal cortex (BA10)

Data table header descriptions
ID_REF
VALUE The value was obtained by median centering.

Data table
ID_REF VALUE
100_g_at 3.520000219
1000_at 13.89333344
1001_at 1.593333364
1002_f_at 0.080000006
1003_s_at 0.24000001
1004_at 0.953333378
1005_at 0.75999999
1006_at 0.180000007
1007_s_at 21.17333412
1008_f_at 3.386666775
1009_at 35.98000336
101_at 1.393333435
1010_at 0.793333352
1011_s_at 6.606667042
1012_at 0.300000012
1013_at 0.013333335
1014_at 3.266666889
1015_s_at 0.973333418
1016_s_at 0.073333338
1017_at 0.780000031

Total number of rows: 12625

Table truncated, full table size 259 Kbytes.




Supplementary file Size Download File type/resource
GSM317678.CEL.gz 2.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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