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Sample GSM317657 Query DataSets for GSM317657
Status Public on Sep 04, 2008
Title depression, BA10-9
Sample type RNA
 
Source name depression
Organism Homo sapiens
Characteristics prefrontal cortex (BA10)
depression
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Biotin-labeled cRNA sample was hybridized according to manufacture's instruction.
Scan protocol Hybridization signal on the chip was scanned using an HP GeneArray scanner (Hewlett-Packard).
Description Gene expression data in human prefromtal cortex
Data processing The data were normalized by median centering by GeneSpring software (Agilent).
 
Submission date Sep 03, 2008
Last update date Mar 16, 2009
Contact name Kazuya Iwamoto
E-mail(s) kaziwamoto@brain.riken.jp
Phone +81-48-467-6949
Fax +81-48-467-6947
URL http://www.brain.riken.go.jp/labs/mdmd/indexe.htm
Organization name RIKEN
Department Brain Science Institute
Lab Lab for Molecular Dynamics of Mental Disorders
Street address 2-1 Hirosawa
City Wako
ZIP/Postal code 351-0198
Country Japan
 
Platform ID GPL8300
Series (1)
GSE12654 Gene expression from human prefrontal cortex (BA10)

Data table header descriptions
ID_REF
VALUE The value was obtained by median centering.

Data table
ID_REF VALUE
100_g_at 5.896713734
1000_at 14.72770023
1001_at 0.835680723
1002_f_at 0.079812214
1003_s_at 0.12206573
1004_at 0.492957771
1005_at 1.488263011
1006_at 0.150234744
1007_s_at 17.65727806
1008_f_at 2.070422649
1009_at 39.88732529
101_at 1.812206507
1010_at 0.605633795
1011_s_at 8.788732529
1012_at 0.323943675
1013_at 0.173708931
1014_at 5.028169155
1015_s_at 1.600938916
1016_s_at 0.164319247
1017_at 1.14553988

Total number of rows: 12625

Table truncated, full table size 259 Kbytes.




Supplementary file Size Download File type/resource
GSM317657.CEL.gz 2.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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